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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7528274 chr1:121286901 A/T NBPF14 chr1:148003642-148025863:- 0.39 9 5.38E-18 Box Plot
THCA rs7528343 chr1:121224466 C/G NBPF14 chr1:148003642-148025863:- -0.4 -8.97 6.94E-18 Box Plot
THCA rs7532615 chr1:121172840 G/T NBPF14 chr1:148003642-148025863:- -0.45 -10.44 3.88E-23 Box Plot
THCA rs7533972 chr1:109179167 A/T NKIRAS1 chr3:23933151-23988082:- -0.44 -6.15 1.62E-9 Box Plot
THCA rs753439 chr2:101088840 A/G LOC285359 chr3:101431278-101432259:+ 0.3 6.07 2.58E-9 Box Plot
THCA rs753440 chr2:101089682 C/T LOC285359 chr3:101431278-101432259:+ 0.35 6.72 5.34E-11 Box Plot
THCA rs75357288 chr10:51804497 C/G FAM21B chr10:47894023-47949412:+ 0.65 8.38 5.93E-16 Box Plot
THCA rs75375429 chr6:26655671 C/T ZNF322B chr9:99957633-99961910:- -0.62 -7.37 7.37E-13 Box Plot
THCA rs7539584 chr1:151182953 C/T PIPSL chr10:95717948-95721297:- 0.35 6.13 1.82E-9 Box Plot
THCA rs7540154 chr1:211199742 C/G CPNE6 chr14:24540046-24547309:+ 0.32 5.93 5.97E-9 Box Plot
THCA rs75407639 chr17:36446641 T/C TBC1D3B chr17:34493061-34503996:- -0.48 -7.16 3.16E-12 Box Plot
THCA rs75437059 chr6:125203985 A/G KIAA1967 chr8:22462257-22477981:+ -0.54 -5.92 5.98E-9 Box Plot
THCA rs7543777 chr1:211171771 T/C CPNE6 chr14:24540046-24547309:+ 0.32 5.91 6.49E-9 Box Plot
THCA rs7544 chr1:26607726 T/G GLRX chr5:95087023-95158709:- 0.26 6.02 3.55E-9 Box Plot
THCA rs75446040 chr2:132268145 G/A CCDC74B chr2:130896860-130902707:- 0.42 7.46 4.13E-13 Box Plot